J20 DMR Plots
Emma Walker
2021-09-24
NB: the p values shown in the tables below are extracted from the DMP stats tables: DMPsInteractionModel_stats_table_J20.csv (genotype and interacton) and DMPsPathology_stats_table_J20.csv
Genotype
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Genotype |
|---|---|---|---|---|---|---|---|---|---|---|
| chr2 | 84518888 | 84518888 | 1 |
|
chr2_2595 | 415516 | NA | FALSE | chr2:84518888 | 1.26e-03 |
| chr2 | 84518925 | 84518925 | 1 |
|
chr2_2595 | 415517 | NA | FALSE | chr2:84518925 | 2.11e-03 |
| chr2 | 84518926 | 84518926 | 1 |
|
chr2_2595 | 415518 | NA | FALSE | chr2:84518926 | 2.20e-03 |
| chr2 | 84518933 | 84518933 | 1 |
|
chr2_2595 | 415519 | NA | FALSE | chr2:84518933 | 3.02e-03 |
| chr2 | 84518934 | 84518934 | 1 |
|
chr2_2595 | 415520 | NA | FALSE | chr2:84518934 | 3.03e-03 |
| chr2 | 84519433 | 84519433 | 1 |
|
chr2_2595 | 415521 | Start | TRUE | chr2:84519433 | 7.83e-09 |
| chr2 | 84519438 | 84519438 | 1 |
|
chr2_2595 | 415522 | NA | TRUE | chr2:84519438 | 7.09e-09 |
| chr2 | 84519439 | 84519439 | 1 |
|
chr2_2595 | 415523 | NA | TRUE | chr2:84519439 | 7.26e-09 |
| chr2 | 84519464 | 84519464 | 1 |
|
chr2_2595 | 415524 | End | TRUE | chr2:84519464 | 1.44e-08 |
| chr2 | 84519624 | 84519624 | 1 |
|
chr2_2595 | 415525 | NA | FALSE | chr2:84519624 | 4.63e-01 |
| chr2 | 84519638 | 84519638 | 1 |
|
chr2_2595 | 415526 | NA | FALSE | chr2:84519638 | 4.63e-01 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Genotype |
|---|---|---|---|---|---|---|---|---|---|---|
| chr6 | 131669771 | 131669771 | 1 |
|
chr6_3628 | 1629614 | Start | TRUE | chr6:131669771 | 4.31e-09 |
| chr6 | 131669779 | 131669779 | 1 |
|
chr6_3628 | 1629615 | End | TRUE | chr6:131669779 | 3.69e-10 |
| chr6 | 131669830 | 131669830 | 1 |
|
chr6_3628 | 1629616 | NA | FALSE | chr6:131669830 | 7.13e-08 |
| chr6 | 131669831 | 131669831 | 1 |
|
chr6_3628 | 1629617 | NA | FALSE | chr6:131669831 | 8.16e-08 |
| chr6 | 131669834 | 131669834 | 1 |
|
chr6_3628 | 1629618 | NA | FALSE | chr6:131669834 | 1.67e-07 |
Genotype*Age
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Interaction |
|---|---|---|---|---|---|---|---|---|---|---|
| chr10 | 8635220 | 8635220 | 1 |
|
chr10_145 | 1303904 | NA | FALSE | chr10:8635220 | 8.06e-01 |
| chr10 | 8635265 | 8635265 | 1 |
|
chr10_145 | 1303905 | NA | FALSE | chr10:8635265 | 8.00e-01 |
| chr10 | 8635596 | 8635596 | 1 |
|
chr10_145 | 1303906 | NA | FALSE | chr10:8635596 | 1.29e-06 |
| chr10 | 8635600 | 8635600 | 1 |
|
chr10_145 | 1303907 | NA | FALSE | chr10:8635600 | 1.03e-06 |
| chr10 | 8635602 | 8635602 | 1 |
|
chr10_145 | 1303908 | NA | FALSE | chr10:8635602 | 8.91e-07 |
| chr10 | 8635608 | 8635608 | 1 |
|
chr10_145 | 1303909 | NA | FALSE | chr10:8635608 | 5.80e-07 |
| chr10 | 8635627 | 8635627 | 1 |
|
chr10_145 | 1303910 | NA | FALSE | chr10:8635627 | 1.24e-07 |
| chr10 | 8635634 | 8635634 | 1 |
|
chr10_145 | 1303911 | NA | FALSE | chr10:8635634 | 4.39e-08 |
| chr10 | 8635639 | 8635639 | 1 |
|
chr10_145 | 1303912 | NA | FALSE | chr10:8635639 | 2.91e-08 |
| chr10 | 8635648 | 8635648 | 1 |
|
chr10_145 | 1303913 | NA | FALSE | chr10:8635648 | 1.23e-08 |
| chr10 | 8635649 | 8635649 | 1 |
|
chr10_145 | 1303914 | NA | FALSE | chr10:8635649 | 1.12e-08 |
| chr10 | 8635653 | 8635653 | 1 |
|
chr10_145 | 1303915 | NA | FALSE | chr10:8635653 | 1.02e-08 |
| chr10 | 8635669 | 8635669 | 1 |
|
chr10_145 | 1303916 | Start | TRUE | chr10:8635669 | 6.49e-09 |
| chr10 | 8635672 | 8635672 | 1 |
|
chr10_145 | 1303917 | End | TRUE | chr10:8635672 | 5.97e-09 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Interaction |
|---|---|---|---|---|---|---|---|---|---|---|
| chr2 | 84518888 | 84518888 | 1 |
|
chr2_2595 | 415516 | NA | FALSE | chr2:84518888 | 1.38e-03 |
| chr2 | 84518925 | 84518925 | 1 |
|
chr2_2595 | 415517 | NA | FALSE | chr2:84518925 | 2.86e-03 |
| chr2 | 84518926 | 84518926 | 1 |
|
chr2_2595 | 415518 | NA | FALSE | chr2:84518926 | 3.00e-03 |
| chr2 | 84518933 | 84518933 | 1 |
|
chr2_2595 | 415519 | NA | FALSE | chr2:84518933 | 4.12e-03 |
| chr2 | 84518934 | 84518934 | 1 |
|
chr2_2595 | 415520 | NA | FALSE | chr2:84518934 | 4.13e-03 |
| chr2 | 84519433 | 84519433 | 1 |
|
chr2_2595 | 415521 | Start | TRUE | chr2:84519433 | 5.15e-09 |
| chr2 | 84519438 | 84519438 | 1 |
|
chr2_2595 | 415522 | NA | TRUE | chr2:84519438 | 4.52e-09 |
| chr2 | 84519439 | 84519439 | 1 |
|
chr2_2595 | 415523 | NA | TRUE | chr2:84519439 | 4.64e-09 |
| chr2 | 84519464 | 84519464 | 1 |
|
chr2_2595 | 415524 | End | TRUE | chr2:84519464 | 9.06e-09 |
| chr2 | 84519624 | 84519624 | 1 |
|
chr2_2595 | 415525 | NA | FALSE | chr2:84519624 | 3.94e-01 |
| chr2 | 84519638 | 84519638 | 1 |
|
chr2_2595 | 415526 | NA | FALSE | chr2:84519638 | 3.93e-01 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Interaction |
|---|---|---|---|---|---|---|---|---|---|---|
| chr6 | 131669771 | 131669771 | 1 |
|
chr6_3628 | 1629614 | Start | TRUE | chr6:131669771 | 1.78e-09 |
| chr6 | 131669779 | 131669779 | 1 |
|
chr6_3628 | 1629615 | End | TRUE | chr6:131669779 | 1.55e-10 |
| chr6 | 131669830 | 131669830 | 1 |
|
chr6_3628 | 1629616 | NA | FALSE | chr6:131669830 | 5.88e-08 |
| chr6 | 131669831 | 131669831 | 1 |
|
chr6_3628 | 1629617 | NA | FALSE | chr6:131669831 | 6.89e-08 |
| chr6 | 131669834 | 131669834 | 1 |
|
chr6_3628 | 1629618 | NA | FALSE | chr6:131669834 | 1.46e-07 |
Pathology
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr17 | 47280820 | 47280820 | 1 |
|
chr17_2400 | 255101 | NA | FALSE | chr17:47280820 | 0.701 |
| chr17 | 47280821 | 47280821 | 1 |
|
chr17_2400 | 255102 | NA | FALSE | chr17:47280821 | 0.698 |
| chr17 | 47280866 | 47280866 | 1 |
|
chr17_2400 | 255103 | Start | TRUE | chr17:47280866 | 0.733 |
| chr17 | 47280867 | 47280867 | 1 |
|
chr17_2400 | 255104 | NA | TRUE | chr17:47280867 | 0.733 |
| chr17 | 47280869 | 47280869 | 1 |
|
chr17_2400 | 255105 | NA | TRUE | chr17:47280869 | 0.737 |
| chr17 | 47280870 | 47280870 | 1 |
|
chr17_2400 | 255106 | End | TRUE | chr17:47280870 | 0.739 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr13 | 110158293 | 110158293 | 1 |
|
chr13_3411 | 358765 | NA | FALSE | chr13:110158293 | 0.891 |
| chr13 | 110158502 | 110158502 | 1 |
|
chr13_3411 | 358766 | NA | FALSE | chr13:110158502 | 0.828 |
| chr13 | 110158735 | 110158735 | 1 |
|
chr13_3411 | 358767 | Start | TRUE | chr13:110158735 | 0.262 |
| chr13 | 110158778 | 110158778 | 1 |
|
chr13_3411 | 358768 | NA | TRUE | chr13:110158778 | 0.377 |
| chr13 | 110158779 | 110158779 | 1 |
|
chr13_3411 | 358769 | End | TRUE | chr13:110158779 | 0.378 |
| chr13 | 110158947 | 110158947 | 1 |
|
chr13_3411 | 358770 | NA | FALSE | chr13:110158947 | 0.815 |
| chr13 | 110158958 | 110158958 | 1 |
|
chr13_3411 | 358771 | NA | FALSE | chr13:110158958 | 0.801 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr4 | 98631093 | 98631093 | 1 |
|
chr4_1975 | 540680 | NA | FALSE | chr4:98631093 | 0.383 |
| chr4 | 98631098 | 98631098 | 1 |
|
chr4_1975 | 540681 | NA | FALSE | chr4:98631098 | 0.383 |
| chr4 | 98631120 | 98631120 | 1 |
|
chr4_1975 | 540682 | NA | FALSE | chr4:98631120 | 0.595 |
| chr4 | 98631178 | 98631178 | 1 |
|
chr4_1975 | 540683 | NA | FALSE | chr4:98631178 | 0.945 |
| chr4 | 98631474 | 98631474 | 1 |
|
chr4_1975 | 540684 | Start | TRUE | chr4:98631474 | 0.978 |
| chr4 | 98631499 | 98631499 | 1 |
|
chr4_1975 | 540685 | End | TRUE | chr4:98631499 | 0.952 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr4 | 110121006 | 110121006 | 1 |
|
chr4_2427 | 551843 | Start | TRUE | chr4:110121006 | 0.977 |
| chr4 | 110121009 | 110121009 | 1 |
|
chr4_2427 | 551844 | NA | TRUE | chr4:110121009 | 0.980 |
| chr4 | 110121013 | 110121013 | 1 |
|
chr4_2427 | 551845 | NA | TRUE | chr4:110121013 | 0.981 |
| chr4 | 110121020 | 110121020 | 1 |
|
chr4_2427 | 551846 | End | TRUE | chr4:110121020 | 0.975 |
| chr4 | 110121417 | 110121417 | 1 |
|
chr4_2427 | 551847 | NA | FALSE | chr4:110121417 | 0.513 |
| chr4 | 110121448 | 110121448 | 1 |
|
chr4_2427 | 551848 | NA | FALSE | chr4:110121448 | 0.522 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr17 | 36870086 | 36870086 | 1 |
|
chr17_1957 | 244974 | NA | FALSE | chr17:36870086 | 0.736 |
| chr17 | 36870124 | 36870124 | 1 |
|
chr17_1957 | 244975 | NA | FALSE | chr17:36870124 | 0.440 |
| chr17 | 36870128 | 36870128 | 1 |
|
chr17_1957 | 244976 | NA | FALSE | chr17:36870128 | 0.428 |
| chr17 | 36870129 | 36870129 | 1 |
|
chr17_1957 | 244977 | NA | FALSE | chr17:36870129 | 0.481 |
| chr17 | 36870142 | 36870142 | 1 |
|
chr17_1957 | 244978 | NA | FALSE | chr17:36870142 | 0.465 |
| chr17 | 36870148 | 36870148 | 1 |
|
chr17_1957 | 244979 | NA | FALSE | chr17:36870148 | 0.480 |
| chr17 | 36870150 | 36870150 | 1 |
|
chr17_1957 | 244980 | NA | FALSE | chr17:36870150 | 0.483 |
| chr17 | 36870177 | 36870177 | 1 |
|
chr17_1957 | 244981 | NA | FALSE | chr17:36870177 | 0.576 |
| chr17 | 36870178 | 36870178 | 1 |
|
chr17_1957 | 244982 | NA | FALSE | chr17:36870178 | 0.585 |
| chr17 | 36870184 | 36870184 | 1 |
|
chr17_1957 | 244983 | NA | FALSE | chr17:36870184 | 0.650 |
| chr17 | 36870208 | 36870208 | 1 |
|
chr17_1957 | 244984 | NA | FALSE | chr17:36870208 | 0.867 |
| chr17 | 36870209 | 36870209 | 1 |
|
chr17_1957 | 244985 | NA | FALSE | chr17:36870209 | 0.871 |
| chr17 | 36870243 | 36870243 | 1 |
|
chr17_1957 | 244986 | Start | TRUE | chr17:36870243 | 0.634 |
| chr17 | 36870245 | 36870245 | 1 |
|
chr17_1957 | 244987 | NA | TRUE | chr17:36870245 | 0.613 |
| chr17 | 36870250 | 36870250 | 1 |
|
chr17_1957 | 244988 | NA | TRUE | chr17:36870250 | 0.556 |
| chr17 | 36870251 | 36870251 | 1 |
|
chr17_1957 | 244989 | NA | TRUE | chr17:36870251 | 0.547 |
| chr17 | 36870275 | 36870275 | 1 |
|
chr17_1957 | 244990 | NA | TRUE | chr17:36870275 | 0.337 |
| chr17 | 36870289 | 36870289 | 1 |
|
chr17_1957 | 244991 | End | TRUE | chr17:36870289 | 0.239 |
| chr17 | 36870421 | 36870421 | 1 |
|
chr17_1957 | 244992 | NA | FALSE | chr17:36870421 | 0.752 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chrX | 7762268 | 7762268 | 1 |
|
chrX_60 | 1799985 | NA | FALSE | chrX:7762268 | 0.260 |
| chrX | 7762279 | 7762279 | 1 |
|
chrX_60 | 1799986 | NA | FALSE | chrX:7762279 | 0.286 |
| chrX | 7762463 | 7762463 | 1 |
|
chrX_60 | 1799987 | NA | FALSE | chrX:7762463 | 0.386 |
| chrX | 7762500 | 7762500 | 1 |
|
chrX_60 | 1799988 | NA | FALSE | chrX:7762500 | 0.782 |
| chrX | 7762506 | 7762506 | 1 |
|
chrX_60 | 1799989 | NA | FALSE | chrX:7762506 | 0.836 |
| chrX | 7762507 | 7762507 | 1 |
|
chrX_60 | 1799990 | NA | FALSE | chrX:7762507 | 0.847 |
| chrX | 7762511 | 7762511 | 1 |
|
chrX_60 | 1799991 | NA | FALSE | chrX:7762511 | 0.907 |
| chrX | 7762512 | 7762512 | 1 |
|
chrX_60 | 1799992 | NA | FALSE | chrX:7762512 | 0.920 |
| chrX | 7762532 | 7762532 | 1 |
|
chrX_60 | 1799993 | Start | TRUE | chrX:7762532 | 0.817 |
| chrX | 7762533 | 7762533 | 1 |
|
chrX_60 | 1799994 | NA | TRUE | chrX:7762533 | 0.805 |
| chrX | 7762539 | 7762539 | 1 |
|
chrX_60 | 1799995 | NA | TRUE | chrX:7762539 | 0.745 |
| chrX | 7762540 | 7762540 | 1 |
|
chrX_60 | 1799996 | NA | TRUE | chrX:7762540 | 0.733 |
| chrX | 7762544 | 7762544 | 1 |
|
chrX_60 | 1799997 | NA | TRUE | chrX:7762544 | 0.695 |
| chrX | 7762545 | 7762545 | 1 |
|
chrX_60 | 1799998 | NA | TRUE | chrX:7762545 | 0.688 |
| chrX | 7762550 | 7762550 | 1 |
|
chrX_60 | 1799999 | NA | TRUE | chrX:7762550 | 0.660 |
| chrX | 7762551 | 7762551 | 1 |
|
chrX_60 | 1800000 | NA | TRUE | chrX:7762551 | 0.652 |
| chrX | 7762563 | 7762563 | 1 |
|
chrX_60 | 1800001 | NA | TRUE | chrX:7762563 | 0.583 |
| chrX | 7762564 | 7762564 | 1 |
|
chrX_60 | 1800002 | NA | TRUE | chrX:7762564 | 0.578 |
| chrX | 7762567 | 7762567 | 1 |
|
chrX_60 | 1800003 | NA | TRUE | chrX:7762567 | 0.572 |
| chrX | 7762568 | 7762568 | 1 |
|
chrX_60 | 1800004 | NA | TRUE | chrX:7762568 | 0.568 |
| chrX | 7762573 | 7762573 | 1 |
|
chrX_60 | 1800005 | NA | TRUE | chrX:7762573 | 0.545 |
| chrX | 7762574 | 7762574 | 1 |
|
chrX_60 | 1800006 | NA | TRUE | chrX:7762574 | 0.540 |
| chrX | 7762585 | 7762585 | 1 |
|
chrX_60 | 1800007 | NA | TRUE | chrX:7762585 | 0.460 |
| chrX | 7762586 | 7762586 | 1 |
|
chrX_60 | 1800008 | NA | TRUE | chrX:7762586 | 0.455 |
| chrX | 7762602 | 7762602 | 1 |
|
chrX_60 | 1800009 | NA | TRUE | chrX:7762602 | 0.418 |
| chrX | 7762603 | 7762603 | 1 |
|
chrX_60 | 1800010 | End | TRUE | chrX:7762603 | 0.420 |
| chrX | 7762855 | 7762855 | 1 |
|
chrX_60 | 1800011 | NA | FALSE | chrX:7762855 | 0.461 |
| chrX | 7762896 | 7762896 | 1 |
|
chrX_60 | 1800012 | NA | FALSE | chrX:7762896 | 0.654 |
| chrX | 7762897 | 7762897 | 1 |
|
chrX_60 | 1800013 | NA | FALSE | chrX:7762897 | 0.654 |
| chrX | 7762908 | 7762908 | 1 |
|
chrX_60 | 1800014 | NA | FALSE | chrX:7762908 | 0.675 |
| chrX | 7762909 | 7762909 | 1 |
|
chrX_60 | 1800015 | NA | FALSE | chrX:7762909 | 0.675 |
| chrX | 7762912 | 7762912 | 1 |
|
chrX_60 | 1800016 | NA | FALSE | chrX:7762912 | 0.677 |
| chrX | 7762913 | 7762913 | 1 |
|
chrX_60 | 1800017 | NA | FALSE | chrX:7762913 | 0.676 |
| chrX | 7762927 | 7762927 | 1 |
|
chrX_60 | 1800018 | NA | FALSE | chrX:7762927 | 0.665 |
| chrX | 7762928 | 7762928 | 1 |
|
chrX_60 | 1800019 | NA | FALSE | chrX:7762928 | 0.666 |
| chrX | 7762931 | 7762931 | 1 |
|
chrX_60 | 1800020 | NA | FALSE | chrX:7762931 | 0.667 |
| chrX | 7762932 | 7762932 | 1 |
|
chrX_60 | 1800021 | NA | FALSE | chrX:7762932 | 0.669 |
| chrX | 7762937 | 7762937 | 1 |
|
chrX_60 | 1800022 | NA | FALSE | chrX:7762937 | 0.684 |
| chrX | 7762941 | 7762941 | 1 |
|
chrX_60 | 1800023 | NA | FALSE | chrX:7762941 | 0.697 |
| chrX | 7762959 | 7762959 | 1 |
|
chrX_60 | 1800024 | NA | FALSE | chrX:7762959 | 0.740 |
| chrX | 7762969 | 7762969 | 1 |
|
chrX_60 | 1800025 | NA | FALSE | chrX:7762969 | 0.826 |
| chrX | 7762974 | 7762974 | 1 |
|
chrX_60 | 1800026 | NA | FALSE | chrX:7762974 | 0.901 |
| chrX | 7762977 | 7762977 | 1 |
|
chrX_60 | 1800027 | NA | FALSE | chrX:7762977 | 0.942 |
| chrX | 7763046 | 7763046 | 1 |
|
chrX_60 | 1800028 | NA | FALSE | chrX:7763046 | 0.819 |
| chrX | 7763065 | 7763065 | 1 |
|
chrX_60 | 1800029 | NA | FALSE | chrX:7763065 | 0.974 |
| chrX | 7763083 | 7763083 | 1 |
|
chrX_60 | 1800030 | NA | FALSE | chrX:7763083 | 0.732 |
| chrX | 7763105 | 7763105 | 1 |
|
chrX_60 | 1800031 | NA | FALSE | chrX:7763105 | 0.602 |
| chrX | 7763106 | 7763106 | 1 |
|
chrX_60 | 1800032 | NA | FALSE | chrX:7763106 | 0.597 |
| chrX | 7763125 | 7763125 | 1 |
|
chrX_60 | 1800033 | NA | FALSE | chrX:7763125 | 0.453 |
| chrX | 7763136 | 7763136 | 1 |
|
chrX_60 | 1800034 | NA | FALSE | chrX:7763136 | 0.336 |
| chrX | 7763552 | 7763552 | 1 |
|
chrX_60 | 1800035 | NA | FALSE | chrX:7763552 | 0.558 |
| chrX | 7763553 | 7763553 | 1 |
|
chrX_60 | 1800036 | NA | FALSE | chrX:7763553 | 0.552 |
| chrX | 7763577 | 7763577 | 1 |
|
chrX_60 | 1800037 | NA | FALSE | chrX:7763577 | 0.424 |
| chrX | 7763578 | 7763578 | 1 |
|
chrX_60 | 1800038 | NA | FALSE | chrX:7763578 | 0.422 |
| chrX | 7763607 | 7763607 | 1 |
|
chrX_60 | 1800039 | NA | FALSE | chrX:7763607 | 0.372 |
| chrX | 7763614 | 7763614 | 1 |
|
chrX_60 | 1800040 | NA | FALSE | chrX:7763614 | 0.385 |
| chrX | 7763615 | 7763615 | 1 |
|
chrX_60 | 1800041 | NA | FALSE | chrX:7763615 | 0.385 |
| chrX | 7763638 | 7763638 | 1 |
|
chrX_60 | 1800042 | NA | FALSE | chrX:7763638 | 0.298 |
| chrX | 7763661 | 7763661 | 1 |
|
chrX_60 | 1800043 | NA | FALSE | chrX:7763661 | 0.284 |
| chrX | 7763871 | 7763871 | 1 |
|
chrX_60 | 1800044 | NA | FALSE | chrX:7763871 | 0.390 |
| chrX | 7763892 | 7763892 | 1 |
|
chrX_60 | 1800045 | NA | FALSE | chrX:7763892 | 0.605 |
| chrX | 7763893 | 7763893 | 1 |
|
chrX_60 | 1800046 | NA | FALSE | chrX:7763893 | 0.596 |
| chrX | 7763938 | 7763938 | 1 |
|
chrX_60 | 1800047 | NA | FALSE | chrX:7763938 | 0.341 |
| chrX | 7763939 | 7763939 | 1 |
|
chrX_60 | 1800048 | NA | FALSE | chrX:7763939 | 0.335 |
| chrX | 7763951 | 7763951 | 1 |
|
chrX_60 | 1800049 | NA | FALSE | chrX:7763951 | 0.328 |
| chrX | 7763965 | 7763965 | 1 |
|
chrX_60 | 1800050 | NA | FALSE | chrX:7763965 | 0.346 |
| chrX | 7763966 | 7763966 | 1 |
|
chrX_60 | 1800051 | NA | FALSE | chrX:7763966 | 0.347 |
| chrX | 7764007 | 7764007 | 1 |
|
chrX_60 | 1800052 | NA | FALSE | chrX:7764007 | 0.545 |
| chrX | 7764478 | 7764478 | 1 |
|
chrX_60 | 1800053 | NA | FALSE | chrX:7764478 | 0.741 |
| chrX | 7764482 | 7764482 | 1 |
|
chrX_60 | 1800054 | NA | FALSE | chrX:7764482 | 0.739 |
| chrX | 7764491 | 7764491 | 1 |
|
chrX_60 | 1800055 | NA | FALSE | chrX:7764491 | 0.730 |
| chrX | 7764492 | 7764492 | 1 |
|
chrX_60 | 1800056 | NA | FALSE | chrX:7764492 | 0.731 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr4 | 95353433 | 95353433 | 1 |
|
chr4_1930 | 539827 | NA | FALSE | chr4:95353433 | 7.77e-01 |
| chr4 | 95353801 | 95353801 | 1 |
|
chr4_1930 | 539828 | NA | FALSE | chr4:95353801 | 3.37e-06 |
| chr4 | 95353836 | 95353836 | 1 |
|
chr4_1930 | 539829 | NA | FALSE | chr4:95353836 | 1.40e-06 |
| chr4 | 95353837 | 95353837 | 1 |
|
chr4_1930 | 539830 | NA | FALSE | chr4:95353837 | 1.49e-06 |
| chr4 | 95353847 | 95353847 | 1 |
|
chr4_1930 | 539831 | NA | FALSE | chr4:95353847 | 3.07e-06 |
| chr4 | 95353851 | 95353851 | 1 |
|
chr4_1930 | 539832 | NA | FALSE | chr4:95353851 | 3.55e-06 |
| chr4 | 95354075 | 95354075 | 1 |
|
chr4_1930 | 539833 | Start | TRUE | chr4:95354075 | 7.61e-02 |
| chr4 | 95354076 | 95354076 | 1 |
|
chr4_1930 | 539834 | NA | TRUE | chr4:95354076 | 7.56e-02 |
| chr4 | 95354091 | 95354091 | 1 |
|
chr4_1930 | 539835 | End | TRUE | chr4:95354091 | 5.83e-02 |
| chr4 | 95354175 | 95354175 | 1 |
|
chr4_1930 | 539836 | NA | FALSE | chr4:95354175 | 6.60e-01 |
| chr4 | 95354202 | 95354202 | 1 |
|
chr4_1930 | 539837 | NA | FALSE | chr4:95354202 | 9.41e-01 |
| chr4 | 95354221 | 95354221 | 1 |
|
chr4_1930 | 539838 | NA | FALSE | chr4:95354221 | 8.65e-01 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr11 | 95101084 | 95101084 | 1 |
|
chr11_3710 | 1116147 | NA | FALSE | chr11:95101084 | 0.519 |
| chr11 | 95101168 | 95101168 | 1 |
|
chr11_3710 | 1116148 | NA | FALSE | chr11:95101168 | 0.690 |
| chr11 | 95101185 | 95101185 | 1 |
|
chr11_3710 | 1116149 | NA | FALSE | chr11:95101185 | 0.562 |
| chr11 | 95101209 | 95101209 | 1 |
|
chr11_3710 | 1116150 | NA | FALSE | chr11:95101209 | 0.413 |
| chr11 | 95101210 | 95101210 | 1 |
|
chr11_3710 | 1116151 | NA | FALSE | chr11:95101210 | 0.408 |
| chr11 | 95101298 | 95101298 | 1 |
|
chr11_3710 | 1116152 | NA | FALSE | chr11:95101298 | 0.549 |
| chr11 | 95101299 | 95101299 | 1 |
|
chr11_3710 | 1116153 | NA | FALSE | chr11:95101299 | 0.545 |
| chr11 | 95101575 | 95101575 | 1 |
|
chr11_3710 | 1116154 | Start | TRUE | chr11:95101575 | 0.262 |
| chr11 | 95101605 | 95101605 | 1 |
|
chr11_3710 | 1116155 | NA | TRUE | chr11:95101605 | 0.226 |
| chr11 | 95101606 | 95101606 | 1 |
|
chr11_3710 | 1116156 | End | TRUE | chr11:95101606 | 0.226 |
| chr11 | 95101828 | 95101828 | 1 |
|
chr11_3710 | 1116157 | NA | FALSE | chr11:95101828 | 0.167 |
| chr11 | 95101832 | 95101832 | 1 |
|
chr11_3710 | 1116158 | NA | FALSE | chr11:95101832 | 0.175 |
| chr11 | 95101833 | 95101833 | 1 |
|
chr11_3710 | 1116159 | NA | FALSE | chr11:95101833 | 0.178 |
| chr11 | 95101846 | 95101846 | 1 |
|
chr11_3710 | 1116160 | NA | FALSE | chr11:95101846 | 0.153 |
| chr11 | 95101965 | 95101965 | 1 |
|
chr11_3710 | 1116161 | NA | FALSE | chr11:95101965 | 0.794 |
| chr11 | 95101989 | 95101989 | 1 |
|
chr11_3710 | 1116162 | NA | FALSE | chr11:95101989 | 0.944 |
| chr11 | 95101990 | 95101990 | 1 |
|
chr11_3710 | 1116163 | NA | FALSE | chr11:95101990 | 0.952 |
| chr11 | 95102289 | 95102289 | 1 |
|
chr11_3710 | 1116164 | NA | FALSE | chr11:95102289 | 0.171 |
| chr11 | 95102320 | 95102320 | 1 |
|
chr11_3710 | 1116165 | NA | FALSE | chr11:95102320 | 0.145 |
| chr11 | 95102331 | 95102331 | 1 |
|
chr11_3710 | 1116166 | NA | FALSE | chr11:95102331 | 0.141 |
| chr11 | 95102332 | 95102332 | 1 |
|
chr11_3710 | 1116167 | NA | FALSE | chr11:95102332 | 0.142 |
| chr11 | 95102662 | 95102662 | 1 |
|
chr11_3710 | 1116168 | NA | FALSE | chr11:95102662 | 0.753 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr16 | 90302992 | 90302992 | 1 |
|
chr16_2086 | 117084 | NA | FALSE | chr16:90302992 | 0.625517 |
| chr16 | 90303082 | 90303082 | 1 |
|
chr16_2086 | 117085 | Start | TRUE | chr16:90303082 | 0.001008 |
| chr16 | 90303115 | 90303115 | 1 |
|
chr16_2086 | 117086 | NA | TRUE | chr16:90303115 | 0.000364 |
| chr16 | 90303116 | 90303116 | 1 |
|
chr16_2086 | 117087 | End | TRUE | chr16:90303116 | 0.000372 |
| chr16 | 90303417 | 90303417 | 1 |
|
chr16_2086 | 117088 | NA | FALSE | chr16:90303417 | 0.741638 |
| chr16 | 90303431 | 90303431 | 1 |
|
chr16_2086 | 117089 | NA | FALSE | chr16:90303431 | 0.739136 |
| chr16 | 90303432 | 90303432 | 1 |
|
chr16_2086 | 117090 | NA | FALSE | chr16:90303432 | 0.743925 |
| seqnames | start | end | width | strand | cluster.id | position | DMR_info | inDMR | Location | p.val.Pathology |
|---|---|---|---|---|---|---|---|---|---|---|
| chr15 | 84873025 | 84873025 | 1 |
|
chr15_2458 | 867644 | NA | FALSE | chr15:84873025 | 0.140 |
| chr15 | 84873104 | 84873104 | 1 |
|
chr15_2458 | 867645 | NA | FALSE | chr15:84873104 | 0.160 |
| chr15 | 84873105 | 84873105 | 1 |
|
chr15_2458 | 867646 | NA | FALSE | chr15:84873105 | 0.160 |
| chr15 | 84873191 | 84873191 | 1 |
|
chr15_2458 | 867647 | Start | TRUE | chr15:84873191 | 0.164 |
| chr15 | 84873192 | 84873192 | 1 |
|
chr15_2458 | 867648 | NA | TRUE | chr15:84873192 | 0.165 |
| chr15 | 84873228 | 84873228 | 1 |
|
chr15_2458 | 867649 | End | TRUE | chr15:84873228 | 0.126 |
| chr15 | 84873360 | 84873360 | 1 |
|
chr15_2458 | 867650 | NA | FALSE | chr15:84873360 | 0.233 |
| chr15 | 84873361 | 84873361 | 1 |
|
chr15_2458 | 867651 | NA | FALSE | chr15:84873361 | 0.233 |
| chr15 | 84873365 | 84873365 | 1 |
|
chr15_2458 | 867652 | NA | FALSE | chr15:84873365 | 0.233 |
| chr15 | 84873385 | 84873385 | 1 |
|
chr15_2458 | 867653 | NA | FALSE | chr15:84873385 | 0.235 |
NB there are 1314 DMRs. 0 DMRs are < 3 DMPs in length. These have been excluded at the top 10 results (by P value) output here.